Viewing lipid POPG (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol)

Name	1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
Shorthand	POPG
Pubchem	9547107
CAS RN	268550-95-4

Associated packages

CHARMM27 Charmm
POPG (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol)

Lipid	POPG 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
Forcefield	CHARMM27
Code	Charmm
Authors	Hyunbum Jang, Naveen Michaud-Agrawal, Jennifer M Johnston, and Thomas B Woolf
Licence
Creation date	21 Aug 2009
POPG parameters as used in Jang et al, Proteins 72 (2008), 299. Parameters did not appear in the paper but were obtained from the authors directly. (OB:changed HAL -> HAL1, HAL2 for use with par_all27_lipid.prm) [read more]

GROMOS53a6 Gromacs
POPG (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol)

Lipid	POPG 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
Forcefield	GROMOS53a6
Code	Gromacs
Authors	A Kukol
Licence
Creation date	31 Aug 2009
D-POPG and L-POPG (the bilayer appears to be pure D-POPG). Lipid parameters of Kukol, JCTC 5 (2009), 615: United atom (UA) lipids were constructed from the GROMOS 53a6 atom types. Experimental areas per lipid are reproduced to within 3% for DPPC without application of surface tension, and 1.5% for POPC. Parameters were copied directly [...] [read more]

Bondini Gromacs
POPG (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol)

Lipid	POPG 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
Forcefield	Bondini
Code	Gromacs
Authors	Wee CL, Gavaghan D, and Sansom MS.
Licence
Creation date	17 Feb 2010
POPG lipid to be used with SJ Marrink's CG lipid parameters as described in: S.J. Marrink, A.H. de Vries, A.E. Mark. Coarse grained model for semi-quantitative lipid simulations. J. Phys. Chem. B, 108:750-760, 2004. [read more]

GROMOS-CKP Gromacs
POPG (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol)

Lipid	POPG 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
Forcefield	GROMOS-CKP
Code	Gromacs
Authors	Piggot TJ, Holdbrook DA, Khalid S
Licence
Creation date	22 May 2012
POPG GROMOS-CKP lipid parameters. These lipid parameters can be used with the GROMOS 53A6 and GROMOS 54A7 protein force fields without any modifications to the parameters. If you use these parameters please read and cite: Electroporation of the E. coli and S. aureus Membranes: Molecular Dynamics [...] [read more]

Slipids/AMBER Gromacs
POPG (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol)

Lipid	POPG 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
Forcefield	Slipids/AMBER
Code	Gromacs
Authors	Jämbeck JP, Lyubartsev AP
Licence
Creation date	10 Nov 2012
See http://people.su.se/~jjm/Stockholm_Lipids/Home.html for for more details and structure files to download [read more]